RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g56420.1 View Network Show in Genome Browser |
| Other Names | Os01g0770700 |
| Description | ctr copper transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32523328-32524183 Nucleotide Length: 486 |
| Protein-coding | LOC_Os01g56420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g01160 LOC_Os01g43940 LOC_Os01g17160 |
| Downstream Genes | LOC_Os09g33450 LOC_Os08g42620 LOC_Os08g42370 LOC_Os06g03540 LOC_Os10g42280 LOC_Os01g70100 LOC_Os07g10600 LOC_Os02g16680 LOC_Os06g03560 LOC_Os04g48410 LOC_Os06g03700 More.. |
| Reference | |
|---|---|
| PubMed | 21510855 20852017 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g56420.1 |
| Rice Genome Annotation | LOC_Os01g56420.1 |
| Ricechip | LOC_Os01g56420.1 |
| KEGG | osa:4324610 dosa:Os01t0770700-00 |
| Entrez-Gene | 4324610 |