RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g56640.1 View Network Show in Genome Browser |
| Other Names | Os01g0773200 |
| Description | transcription factor jumonji, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32675440-32681407 Nucleotide Length: 1569 |
| Protein-coding | LOC_Os01g56640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g36630 |
| Downstream Genes | LOC_Os02g58210 LOC_Os03g31594 LOC_Os03g22540 LOC_Os10g42690 LOC_Os01g67970 LOC_Os05g23670 LOC_Os05g10770 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 osa-miR1439 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g56640.1 |
| Rice Genome Annotation | LOC_Os01g56640.1 |
| Ricechip | LOC_Os01g56640.1 |
| KEGG | osa:4324716 dosa:Os01t0773200-02 |
| Entrez-Gene | 4324716 |