RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g56680.2 View Network Show in Genome Browser |
| Other Names | Os01g0773700 |
| Description | photosystem II reaction center W protein, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32707831-32709287 Nucleotide Length: 390 |
| Protein-coding | LOC_Os01g56680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55570 LOC_Os01g52240 LOC_Os01g31690 |
| Downstream Genes | LOC_Os07g47640 LOC_Os12g23200 LOC_Os07g38960 LOC_Os04g33830 LOC_Os09g30340 LOC_Os07g37240 LOC_Os05g48630 LOC_Os06g21590 LOC_Os08g35760 LOC_Os07g04840 LOC_Os02g37060 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR172a osa-miR172d-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g56680.2 |
| Rice Genome Annotation | LOC_Os01g56680.2 |
| Ricechip | LOC_Os01g56680.2 |
| KEGG | osa:4327150 dosa:Os01t0773700-02 |
| Entrez-Gene | 4327150 |