RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g56780.1 View Network Show in Genome Browser |
| Other Names | Os01g0775100 |
| Description | plus-3 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32759124-32764841 Nucleotide Length: 2688 |
| Protein-coding | LOC_Os01g56780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0040007 | growth | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os12g35030 LOC_Os01g66140 LOC_Os09g36090 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR530-5p osa-miR1861c |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g56780.1 |
| Rice Genome Annotation | LOC_Os01g56780.1 |
| Ricechip | LOC_Os01g56780.1 |
| KEGG | osa:4327159 dosa:Os01t0775100-01 |
| Entrez-Gene | 4327159 |