RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g56910.1 View Network Show in Genome Browser |
| Other Names | Os01g0777101,Os01g0777000 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32869293-32878216 Nucleotide Length: 3210 |
| Protein-coding | LOC_Os01g56910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g01960 |
| Downstream Genes | LOC_Os08g34970 LOC_Os11g32960 LOC_Os09g33450 LOC_Os05g36090 LOC_Os02g10790 LOC_Os03g10750 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5149 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g56910.1 |
| Rice Genome Annotation | LOC_Os01g56910.1 |
| Ricechip | LOC_Os01g56910.1 |
| KEGG | osa:4327897 dosa:Os01t0777101-00dosa:Os01t0777000-00 |
| Entrez-Gene | 4332450 |