RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g56930.1 View Network Show in Genome Browser |
| Other Names | Os01g0777200 |
| Description | eukaryotic aspartyl protease domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32886850-32891417 Nucleotide Length: 1515 |
| Protein-coding | LOC_Os01g56930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12800 LOC_Os01g08760 LOC_Os01g10280 LOC_Os01g38670 LOC_Os01g09460 LOC_Os01g08560 LOC_Os01g16930 LOC_Os01g12880 LOC_Os01g38680 LOC_Os01g51200 LOC_Os01g44130 More.. |
| Downstream Genes | LOC_Os08g09190 LOC_Os02g50360 LOC_Os12g12860 LOC_Os07g44710 LOC_Os02g07760 LOC_Os06g13180 LOC_Os07g44430 LOC_Os10g11140 LOC_Os06g46770 LOC_Os05g42424 LOC_Os02g06640 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g56930.1 |
| Rice Genome Annotation | LOC_Os01g56930.1 |
| Ricechip | LOC_Os01g56930.1 |
| KEGG | osa:4327898 dosa:Os01t0777200-01 |
| Entrez-Gene | 4327898 |