RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g56990.1 View Network Show in Genome Browser |
| Other Names | Os01g0777800 |
| Description | Regulator of chromosome condensation domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 32929037-32932792 Nucleotide Length: 1206 |
| Protein-coding | LOC_Os01g56990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g52430 LOC_Os01g53280 |
| Downstream Genes | LOC_Os08g04780 LOC_Os08g44340 LOC_Os03g63470 LOC_Os11g11490 LOC_Os05g03620 LOC_Os03g43670 LOC_Os02g36960 LOC_Os05g45220 LOC_Os08g04770 LOC_Os05g13390 LOC_Os07g20150 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 osa-miR5534b |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g56990.1 |
| Rice Genome Annotation | LOC_Os01g56990.1 |
| Ricechip | LOC_Os01g56990.1 |
| KEGG | osa:4326428 dosa:Os01t0777800-01 |
| Entrez-Gene | 4326428 |