RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g57110.1 View Network Show in Genome Browser |
| Other Names | Os01g0779400 |
| Description | SNF2 family N-terminal domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 33000047-33010221 Nucleotide Length: 3687 |
| Protein-coding | LOC_Os01g57110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54240 LOC_Os01g55050 LOC_Os01g46980 LOC_Os01g44130 LOC_Os01g48280 LOC_Os01g01700 LOC_Os01g54870 LOC_Os01g36920 LOC_Os01g36890 LOC_Os01g12260 LOC_Os01g04260 More.. |
| Downstream Genes | LOC_Os08g35700 LOC_Os08g33340 LOC_Os08g33082 LOC_Os05g15890 LOC_Os11g48030 LOC_Os11g48090 LOC_Os10g37490 LOC_Os09g24200 LOC_Os03g44484 LOC_Os02g52250 LOC_Os06g08790 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g57110.1 |
| Rice Genome Annotation | LOC_Os01g57110.1 |
| Ricechip | LOC_Os01g57110.1 |
| KEGG | osa:4326436 dosa:Os01t0779400-02 |
| Entrez-Gene | 4326436 |