RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g57220.1 View Network Show in Genome Browser |
| Other Names | Os01g0780500 |
| Description | secretory carrier-associated membrane protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 33059187-33065392 Nucleotide Length: 861 |
| Protein-coding | LOC_Os01g57220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g39630 |
| Downstream Genes | LOC_Os03g63920 LOC_Os03g01910 LOC_Os07g37740 LOC_Os02g07490 LOC_Os11g16540 LOC_Os05g42330 LOC_Os03g43890 LOC_Os10g34180 LOC_Os02g32740 LOC_Os03g50850 LOC_Os03g38590 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g57220.1 |
| Rice Genome Annotation | LOC_Os01g57220.1 |
| Ricechip | LOC_Os01g57220.1 |
| KEGG | osa:4327836 dosa:Os01t0780500-01 |
| Entrez-Gene | 4327836 |