RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g57460.1 View Network Show in Genome Browser |
| Other Names | Os01g0783600 |
| Description | frataxin, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 33205177-33208686 Nucleotide Length: 597 |
| Protein-coding | LOC_Os01g57460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g47340 LOC_Os01g53450 |
| Downstream Genes | LOC_Os04g10400 LOC_Os07g01930 LOC_Os07g37720 LOC_Os03g11410 LOC_Os09g16910 LOC_Os05g29760 LOC_Os08g02640 LOC_Os06g47210 LOC_Os02g07230 LOC_Os07g04240 LOC_Os12g37960 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g57460.1 |
| Rice Genome Annotation | LOC_Os01g57460.1 |
| Ricechip | LOC_Os01g57460.1 |
| KEGG | osa:4327058 dosa:Os01t0783600-01 |
| Entrez-Gene | 4327058 |