RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g57720.3 View Network Show in Genome Browser |
| Other Names | Os01g0786900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 33369501-33374897 Nucleotide Length: 2211 |
| Protein-coding | LOC_Os01g57720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g57710 LOC_Os01g01420 |
| Downstream Genes | LOC_Os02g55200 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1858a osa-miR1858b |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g57720.3 |
| Rice Genome Annotation | LOC_Os01g57720.3 |
| Ricechip | LOC_Os01g57720.3 |
| KEGG | osa:4327051 dosa:Os01t0786900-01 |
| Entrez-Gene | 4327051 |