RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g57854.1 View Network Show in Genome Browser |
| Other Names | Os01g0788400 |
| Description | pectinesterase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 33453433-33460087 Nucleotide Length: 1641 |
| Protein-coding | LOC_Os01g57854 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os11g45220 LOC_Os01g69140 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00040 rn00500 rn01100 |
| Metacyc Pathways | PWY-1081 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g57854.1 |
| Rice Genome Annotation | LOC_Os01g57854.1 |
| Ricechip | LOC_Os01g57854.1 |
| KEGG | osa:4325861 dosa:Os01t0788400-01 |
| Entrez-Gene | 4325861 |