RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g57890.1 View Network Show in Genome Browser |
| Other Names | Os01g0788800 |
| Description | Homeobox domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 33471900-33478535 Nucleotide Length: 2130 |
| Protein-coding | LOC_Os01g57890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os10g35250 LOC_Os10g40590 LOC_Os11g43640 LOC_Os05g29870 LOC_Os11g32960 LOC_Os09g33450 LOC_Os05g36090 LOC_Os06g51220 LOC_Os03g03164 LOC_Os08g05870 LOC_Os08g42370 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g57890.1 |
| Rice Genome Annotation | LOC_Os01g57890.1 |
| Ricechip | LOC_Os01g57890.1 |
| KEGG | osa:4325864 dosa:Os01t0788800-01 |
| Entrez-Gene | 4325864 |