RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g57930.1 View Network Show in Genome Browser |
| Other Names | Os01g0789100 |
| Description | CDP-alcohol phosphatidyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 33489285-33492959 Nucleotide Length: 990 |
| Protein-coding | LOC_Os01g57930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51380 LOC_Os01g40470 LOC_Os01g53890 LOC_Os01g43030 LOC_Os01g55360 LOC_Os01g16640 LOC_Os01g42980 LOC_Os01g18860 |
| Downstream Genes | LOC_Os02g02750 LOC_Os02g03110 LOC_Os06g10280 LOC_Os07g36470 LOC_Os11g06890 LOC_Os05g01560 LOC_Os02g34510 LOC_Os06g45120 LOC_Os02g07870 LOC_Os01g73130 LOC_Os06g37180 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00564 rn01100 |
| Metacyc Pathways | PHOSLIPSYN2-PWY PHOSLIPSYN-PWY PWY-5269 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g57930.1 |
| Rice Genome Annotation | LOC_Os01g57930.1 |
| Ricechip | LOC_Os01g57930.1 |
| KEGG | osa:4325867 dosa:Os01t0789100-01 |
| Entrez-Gene | 4325867 |