RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g58000.1 View Network Show in Genome Browser |
| Other Names | |
| Description | ATP synthase epsilon chain, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 33539907-33540440 Nucleotide Length: 414 |
| Protein-coding | LOC_Os01g58000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49190 LOC_Os01g08350 LOC_Os01g51380 LOC_Os01g39010 LOC_Os01g17170 LOC_Os01g46380 |
| Downstream Genes | LOC_Os07g32880 LOC_Os06g02980 LOC_Os03g55874 LOC_Os05g47980 LOC_Os06g39740 LOC_Os12g10570 LOC_Os05g35320 LOC_Os10g17280 LOC_Os03g48471 LOC_Os09g08880 LOC_Os10g21240 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g58000.1 |
| Rice Genome Annotation | LOC_Os01g58000.1 |
| Ricechip | LOC_Os01g58000.1 |