RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g58049.1 View Network Show in Genome Browser |
| Other Names | |
| Description | photosystem I assembly protein ycf4, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 33585501-33586432 Nucleotide Length: 363 |
| Protein-coding | LOC_Os01g58049 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g52240 LOC_Os01g41710 |
| Downstream Genes | LOC_Os05g01950 LOC_Os07g37240 LOC_Os03g03860 LOC_Os03g17070 LOC_Os04g16680 LOC_Os03g46770 LOC_Os03g45280 LOC_Os02g30320 LOC_Os03g22370 LOC_Os09g30340 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g58049.1 |
| Rice Genome Annotation | LOC_Os01g58049.1 |
| Ricechip | LOC_Os01g58049.1 |