RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g58470.1 View Network Show in Genome Browser |
| Other Names | Os01g0798500 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 33803154-33805393 Nucleotide Length: 879 |
| Protein-coding | LOC_Os01g58470 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48690 LOC_Os01g54540 LOC_Os01g32730 |
| Downstream Genes | LOC_Os08g44290 LOC_Os02g15900 LOC_Os03g49710 LOC_Os03g15870 LOC_Os03g56840 LOC_Os06g22690 LOC_Os03g17580 LOC_Os07g38300 LOC_Os02g41470 LOC_Os03g03020 LOC_Os01g59060 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g58470.1 |
| Rice Genome Annotation | LOC_Os01g58470.1 |
| Ricechip | LOC_Os01g58470.1 |
| KEGG | osa:4327627 dosa:Os01t0798500-02 |
| Entrez-Gene | 4327627 |