RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g58550.2 View Network Show in Genome Browser |
| Other Names | Os01g0799500 |
| Description | methyladenine glycosylase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 33837388-33841176 Nucleotide Length: 963 |
| Protein-coding | LOC_Os01g58550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42520 LOC_Os01g57650 LOC_Os01g55610 LOC_Os01g48990 |
| Downstream Genes | LOC_Os02g18410 LOC_Os11g44810 LOC_Os07g41580 LOC_Os02g16500 LOC_Os02g15900 LOC_Os04g38570 LOC_Os11g30430 LOC_Os06g05550 LOC_Os03g36540 LOC_Os03g08790 LOC_Os04g57800 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g58550.2 |
| Rice Genome Annotation | LOC_Os01g58550.2 |
| Ricechip | LOC_Os01g58550.2 |
| KEGG | osa:4327631 dosa:Os01t0799500-01 |
| Entrez-Gene | 4327631 |