RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g58730.1 View Network Show in Genome Browser |
| Other Names | Os01g0801500 |
| Description | glycosyl hydrolases family 17, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 33949387-33951631 Nucleotide Length: 1014 |
| Protein-coding | LOC_Os01g58730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g28450 LOC_Os01g23740 LOC_Os01g38510 LOC_Os01g40860 LOC_Os01g19840 LOC_Os01g47070 LOC_Os01g18860 LOC_Os01g55040 LOC_Os01g25386 LOC_Os01g28500 LOC_Os01g22010 More.. |
| Downstream Genes | LOC_Os07g08430 LOC_Os08g17680 LOC_Os09g27830 LOC_Os11g09280 LOC_Os03g01180 LOC_Os07g08330 LOC_Os07g12890 LOC_Os09g19734 LOC_Os03g03450 LOC_Os05g23720 LOC_Os02g38230 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g58730.1 |
| Rice Genome Annotation | LOC_Os01g58730.1 |
| Ricechip | LOC_Os01g58730.1 |
| KEGG | osa:4327963 dosa:Os01t0801500-01 |
| Entrez-Gene | 4327963 |