RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g59080.1 View Network Show in Genome Browser |
| Other Names | Os01g0805200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 34138326-34139709 Nucleotide Length: 630 |
| Protein-coding | LOC_Os01g59080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59060 |
| Downstream Genes | LOC_Os08g07060 LOC_Os04g34460 LOC_Os06g01460 LOC_Os05g28090 LOC_Os02g15900 LOC_Os05g01750 LOC_Os03g29730 LOC_Os03g50270 LOC_Os05g27100 LOC_Os11g23790 LOC_Os08g36140 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g59080.1 |
| Rice Genome Annotation | LOC_Os01g59080.1 |
| Ricechip | LOC_Os01g59080.1 |
| KEGG | osa:4327543 dosa:Os01t0805200-01 |
| Entrez-Gene | 4327543 |