RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g59340.1 View Network Show in Genome Browser |
| Other Names | Os01g0807900 |
| Description | dihydropyrimidinase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 34295651-34307049 Nucleotide Length: 1620 |
| Protein-coding | LOC_Os01g59340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54370 |
| Downstream Genes | LOC_Os07g30170 LOC_Os02g50350 LOC_Os02g13140 LOC_Os01g72350 LOC_Os12g28270 LOC_Os08g15030 LOC_Os12g07290 LOC_Os08g45180 LOC_Os02g47850 LOC_Os04g24530 LOC_Os07g33240 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn00410 rn00770 rn01100 rn00983 |
| Metacyc Pathways | PWY-3982 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g59340.1 |
| Rice Genome Annotation | LOC_Os01g59340.1 |
| Ricechip | LOC_Os01g59340.1 |
| KEGG | osa:4327558 dosa:Os01t0807900-01 |
| Entrez-Gene | 4327558 |