RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g59510.1 View Network Show in Genome Browser |
| Other Names | Os01g0810100 |
| Description | chloroplast ribonuclease III domain protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 34412853-34416988 Nucleotide Length: 1602 |
| Protein-coding | LOC_Os01g59510 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g56600 LOC_Os01g03660 |
| Downstream Genes | LOC_Os05g49610 LOC_Os03g63740 LOC_Os01g68120 LOC_Os05g18850 LOC_Os09g32030 LOC_Os08g04450 LOC_Os03g38740 LOC_Os03g02970 LOC_Os07g18720 LOC_Os05g25400 LOC_Os10g28600 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g59510.1 |
| Rice Genome Annotation | LOC_Os01g59510.1 |
| Ricechip | LOC_Os01g59510.1 |
| KEGG | osa:4327567 dosa:Os01t0810100-01 |
| Entrez-Gene | 4327567 |