RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g59790.3 View Network Show in Genome Browser |
| Other Names | Os01g0813400 |
| Description | ADP-ribosylation factor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 34580803-34584323 Nucleotide Length: 546 |
| Protein-coding | LOC_Os01g59790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16030 LOC_Os01g51170 LOC_Os01g17430 LOC_Os01g23620 LOC_Os01g54910 LOC_Os01g10820 LOC_Os01g12880 LOC_Os01g05694 LOC_Os01g20860 LOC_Os01g05744 LOC_Os01g05720 More.. |
| Downstream Genes | LOC_Os05g41060 LOC_Os09g34970 LOC_Os03g59740 LOC_Os03g14260 LOC_Os02g22090 LOC_Os07g12200 LOC_Os07g12170 LOC_Os06g42000 LOC_Os03g13970 LOC_Os04g52270 LOC_Os07g10150 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g59790.3 |
| Rice Genome Annotation | LOC_Os01g59790.3 |
| Ricechip | LOC_Os01g59790.3 |
| KEGG | osa:4327591 dosa:Os01t0813400-01 |
| Entrez-Gene | 4327591 |