RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g59800.1 View Network Show in Genome Browser |
| Other Names | Os01g0813500 |
| Description | EAP30/Vps36 family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 34583515-34587110 Nucleotide Length: 1344 |
| Protein-coding | LOC_Os01g59800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g46932 LOC_Os01g32280 LOC_Os01g49010 LOC_Os01g51250 |
| Downstream Genes | LOC_Os06g49990 LOC_Os02g55950 LOC_Os02g58640 LOC_Os03g19890 LOC_Os03g60460 LOC_Os04g52270 LOC_Os03g30460 LOC_Os03g61640 LOC_Os02g38300 LOC_Os09g36020 LOC_Os10g34680 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g59800.1 |
| Rice Genome Annotation | LOC_Os01g59800.1 |
| Ricechip | LOC_Os01g59800.1 |
| KEGG | osa:4327592 dosa:Os01t0813500-01 |
| Entrez-Gene | 4327592 |