RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g59860.1 View Network Show in Genome Browser |
| Other Names | Os01g0814000 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 34620233-34623931 Nucleotide Length: 1602 |
| Protein-coding | LOC_Os01g59860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g56000 |
| Downstream Genes | LOC_Os11g36390 LOC_Os12g06910 LOC_Os04g06770 LOC_Os04g33510 LOC_Os10g34750 LOC_Os08g16790 LOC_Os05g51790 LOC_Os02g37920 LOC_Os08g35220 LOC_Os06g11180 LOC_Os03g14520 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g59860.1 |
| Rice Genome Annotation | LOC_Os01g59860.1 |
| Ricechip | LOC_Os01g59860.1 |
| KEGG | osa:4327595 dosa:Os01t0814000-01 |
| Entrez-Gene | 4327595 |