RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g60190.1 View Network Show in Genome Browser |
| Other Names | Os01g0817700 |
| Description | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 34804284-34808095 Nucleotide Length: 1680 |
| Protein-coding | LOC_Os01g60190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g47450 LOC_Os01g27140 LOC_Os01g49290 LOC_Os01g58610 LOC_Os01g59990 LOC_Os01g25610 |
| Downstream Genes | LOC_Os06g21380 LOC_Os02g57060 LOC_Os12g35040 LOC_Os04g58090 LOC_Os02g56850 LOC_Os09g36450 LOC_Os02g40500 LOC_Os01g62420 LOC_Os04g42930 LOC_Os04g37600 LOC_Os05g23620 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00010 rn00260 rn00680 rn01100 rn01110 rn01120 |
| Metacyc Pathways | P124-PWY ANAEROFRUCAT-PWY GLUCONEO-PWY PWY-1042 PWY-3801 GLYCOLYSIS PWY-2221 PWY-1622 PWY-6142 PWY-5484 ANAGLYCOLYSIS-PWY P341-PWY P122-PWY PWY-5723 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g60190.1 |
| Rice Genome Annotation | LOC_Os01g60190.1 |
| Ricechip | LOC_Os01g60190.1 |
| KEGG | osa:4327493 dosa:Os01t0817700-01 |
| Entrez-Gene | 4327493 |