RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g60230.4 View Network Show in Genome Browser |
| Other Names | Os01g0818000 |
| Description | auxin efflux carrier component, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 34834581-34838747 Nucleotide Length: 1299 |
| Protein-coding | LOC_Os01g60230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g45550 LOC_Os01g45830 LOC_Os01g12570 LOC_Os01g09620 LOC_Os01g49190 LOC_Os01g51380 LOC_Os01g12560 |
| Downstream Genes | LOC_Os05g40330 LOC_Os06g44970 LOC_Os06g12610 LOC_Os01g69070 LOC_Os03g15350 LOC_Os04g55210 LOC_Os05g24601 LOC_Os07g01030 LOC_Os01g61710 LOC_Os08g28080 LOC_Os03g63490 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2093-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g60230.4 |
| Rice Genome Annotation | LOC_Os01g60230.4 |
| Ricechip | LOC_Os01g60230.4 |
| KEGG | osa:4327495 dosa:Os01t0818000-01 |
| Entrez-Gene | 4327495 |