RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g61044.1 View Network Show in Genome Browser |
| Other Names | Os01g0825800 |
| Description | transmembrane amino acid transporter protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 35320780-35323282 Nucleotide Length: 1380 |
| Protein-coding | LOC_Os01g61044 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g41420 LOC_Os01g41400 LOC_Os01g40410 |
| Downstream Genes | LOC_Os02g01100 LOC_Os12g38570 LOC_Os03g06139 LOC_Os02g44980 LOC_Os04g47780 LOC_Os02g54730 LOC_Os04g44430 LOC_Os07g12770 LOC_Os04g38680 LOC_Os06g12320 LOC_Os11g28980 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2926 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g61044.1 |
| Rice Genome Annotation | LOC_Os01g61044.1 |
| Ricechip | LOC_Os01g61044.1 |
| KEGG | osa:4327515 dosa:Os01t0825800-01 |
| Entrez-Gene | 4327515 |