RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g61080.1 View Network Show in Genome Browser |
| Other Names | Os01g0826400 |
| Description | WRKY24, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 35347978-35350645 Nucleotide Length: 1668 |
| Protein-coding | LOC_Os01g61080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g58310 LOC_Os01g38980 |
| Downstream Genes | LOC_Os04g34050 LOC_Os02g33600 LOC_Os08g37660 LOC_Os05g27730 LOC_Os10g41330 LOC_Os04g02910 LOC_Os02g08440 LOC_Os10g39090 LOC_Os01g72370 LOC_Os01g72360 LOC_Os11g12340 More.. |
| Reference | |
|---|---|
| PubMed | 19199048 15618416 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g61080.1 |
| Rice Genome Annotation | LOC_Os01g61080.1 |
| Ricechip | LOC_Os01g61080.1 |
| KEGG | osa:4327518 dosa:Os01t0826400-01 |
| Entrez-Gene | 4327518 |