RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os01g61380.1 View Network Show in Genome Browser
Other Names	Os01g0829800
Description	lactate/malate dehydrogenase, putative, expressed
Gene Attributes	Chromosome: Chr1 CDS Coordinates (5'-3'): 35499017-35501765 Nucleotide Length: 1191
Protein-coding	LOC_Os01g61380

Gene Ontology Classification
GO	Name	Type	Code
GO:0008152	metabolic process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005576	extracellular region	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005739	mitochondrion	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA
GO:0005773	vacuole	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g59990 LOC_Os01g46070 LOC_Os01g52214 LOC_Os01g59730 LOC_Os01g23610 LOC_Os01g60790 LOC_Os01g22520 LOC_Os01g54870 LOC_Os01g25610 LOC_Os01g10820 LOC_Os01g49190 More..
Downstream Genes	LOC_Os03g21950 LOC_Os02g10070 LOC_Os11g33240 LOC_Os03g50540 LOC_Os06g50000 LOC_Os04g24520 LOC_Os03g18420 LOC_Os06g35540 LOC_Os05g31290 LOC_Os03g56300 LOC_Os03g09210 More..

Pathways
KEGG Pathways	rn00020 rn00620 rn00630 rn00680 rn00710 rn00720 rn01100 rn01110 rn01120
Metacyc Pathways	MALATE-ASPARTATE-SHUTTLE-PWY TCA ANARESP1-PWY GLUCONEO-PWY FERMENTATION-PWY P23-PWY P105-PWY

Database Links
Gramene	LOC_Os01g61380.1
Rice Genome Annotation	LOC_Os01g61380.1
Ricechip	LOC_Os01g61380.1
KEGG	osa:4327423 dosa:Os01t0829800-01
Entrez-Gene	4327423