RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g61830.1 View Network Show in Genome Browser |
| Other Names | Os01g0834700 |
| Description | zinc finger C-x8-C-x5-C-x3-H type family protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 35767582-35772377 Nucleotide Length: 1101 |
| Protein-coding | LOC_Os01g61830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g45730 LOC_Os01g09620 LOC_Os01g42970 LOC_Os01g33050 LOC_Os01g33030 LOC_Os01g34200 LOC_Os01g59500 LOC_Os01g13730 |
| Downstream Genes | LOC_Os07g43470 LOC_Os04g56350 LOC_Os04g02730 LOC_Os02g19804 LOC_Os05g41100 LOC_Os08g45010 LOC_Os05g05220 LOC_Os01g68310 LOC_Os08g06330 LOC_Os06g49080 LOC_Os04g57600 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g61830.1 |
| Rice Genome Annotation | LOC_Os01g61830.1 |
| Ricechip | LOC_Os01g61830.1 |
| KEGG | osa:4327416 dosa:Os01t0834700-01 |
| Entrez-Gene | 4327416 |