RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g62040.1 View Network Show in Genome Browser |
| Other Names | Os01g0837500 |
| Description | ruvB-like, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 35902960-35908326 Nucleotide Length: 1368 |
| Protein-coding | LOC_Os01g62040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g61920 LOC_Os01g38970 LOC_Os01g27040 LOC_Os01g51380 LOC_Os01g47600 LOC_Os01g19260 LOC_Os01g16414 LOC_Os01g32300 LOC_Os01g42030 LOC_Os01g59990 LOC_Os01g59730 More.. |
| Downstream Genes | LOC_Os06g08770 LOC_Os03g22900 LOC_Os04g09860 LOC_Os02g08380 LOC_Os05g46330 LOC_Os01g73310 LOC_Os08g09320 LOC_Os05g01600 LOC_Os08g04280 LOC_Os11g06390 LOC_Os06g04580 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g62040.1 |
| Rice Genome Annotation | LOC_Os01g62040.1 |
| Ricechip | LOC_Os01g62040.1 |
| KEGG | osa:4327368 dosa:Os01t0837500-01 |
| Entrez-Gene | 4327368 |