RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g62210.2 View Network Show in Genome Browser |
| Other Names | Os01g0839300 |
| Description | 50S ribosomal protein L17, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 36007366-36009974 Nucleotide Length: 258 |
| Protein-coding | LOC_Os01g62210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42640 LOC_Os01g14830 LOC_Os01g15290 LOC_Os01g10820 LOC_Os01g42980 LOC_Os01g54540 LOC_Os01g61814 LOC_Os01g47330 LOC_Os01g56400 LOC_Os01g40250 LOC_Os01g27730 More.. |
| Downstream Genes | LOC_Os03g54040 LOC_Os03g24020 LOC_Os03g03360 LOC_Os12g42180 LOC_Os03g49710 LOC_Os09g19954 LOC_Os08g21840 LOC_Os06g39700 LOC_Os09g07910 LOC_Os03g26860 LOC_Os02g06700 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g62210.2 |
| Rice Genome Annotation | LOC_Os01g62210.2 |
| Ricechip | LOC_Os01g62210.2 |
| KEGG | osa:4327382 dosa:Os01t0839300-01 |
| Entrez-Gene | 4327382 |