RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g62290.2 View Network Show in Genome Browser |
| Other Names | Os01g0840100 |
| Description | DnaK family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 36039706-36043510 Nucleotide Length: 1845 |
| Protein-coding | LOC_Os01g62290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g50700 LOC_Os01g32870 LOC_Os01g42190 LOC_Os01g17030 LOC_Os01g13760 LOC_Os01g27740 LOC_Os01g53020 LOC_Os01g54550 LOC_Os01g04380 LOC_Os01g04370 LOC_Os01g04360 More.. |
| Downstream Genes | LOC_Os05g48810 LOC_Os09g30412 LOC_Os09g30418 LOC_Os03g44620 LOC_Os08g39140 LOC_Os06g02620 LOC_Os03g57340 LOC_Os02g43930 LOC_Os04g46390 LOC_Os12g07060 LOC_Os02g20394 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR531b |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g62290.2 |
| Rice Genome Annotation | LOC_Os01g62290.2 |
| Ricechip | LOC_Os01g62290.2 |
| KEGG | osa:4327388 dosa:Os01t0840100-01 |
| Entrez-Gene | 4327388 |