RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g62440.3 View Network Show in Genome Browser |
| Other Names | Os01g0841800 |
| Description | ribonuclease protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 36141662-36146302 Nucleotide Length: 1479 |
| Protein-coding | LOC_Os01g62440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g53890 LOC_Os01g62420 |
| Downstream Genes | LOC_Os12g37610 LOC_Os10g35690 LOC_Os02g57670 LOC_Os02g27440 LOC_Os06g16980 LOC_Os05g37884 LOC_Os03g49220 LOC_Os03g15950 LOC_Os04g23830 LOC_Os09g20820 LOC_Os02g26660 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g62440.3 |
| Rice Genome Annotation | LOC_Os01g62440.3 |
| Ricechip | LOC_Os01g62440.3 |
| KEGG | osa:4327498 dosa:Os01t0841800-01 |
| Entrez-Gene | 4327498 |