RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g62490.1 View Network Show in Genome Browser |
| Other Names | Os01g0842500 |
| Description | laccase precursor protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 36177289-36180127 Nucleotide Length: 1734 |
| Protein-coding | LOC_Os01g62490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g06580 LOC_Os01g11010 LOC_Os01g59150 LOC_Os01g47780 LOC_Os01g50010 |
| Downstream Genes | LOC_Os04g42620 LOC_Os05g48270 LOC_Os08g24790 LOC_Os07g40890 LOC_Os05g07060 LOC_Os07g48060 LOC_Os05g04820 LOC_Os03g13460 LOC_Os08g23180 LOC_Os03g14170 LOC_Os05g01810 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR397a osa-miR397b |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g62490.1 |
| Rice Genome Annotation | LOC_Os01g62490.1 |
| Ricechip | LOC_Os01g62490.1 |
| KEGG | osa:4327501 dosa:Os01t0842500-01 |
| Entrez-Gene | 4327501 |