RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g63260.1 View Network Show in Genome Browser |
| Other Names | Os01g0851600 |
| Description | 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 36667119-36667925 Nucleotide Length: 807 |
| Protein-coding | LOC_Os01g63260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g05670 LOC_Os01g13760 LOC_Os01g15260 |
| Downstream Genes | LOC_Os05g48810 LOC_Os09g20660 LOC_Os08g31830 LOC_Os12g10720 LOC_Os11g14040 LOC_Os02g35590 LOC_Os06g01360 LOC_Os09g16910 LOC_Os12g28270 LOC_Os12g10730 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00905 rn01110 rn01100 |
| Metacyc Pathways | PWY-2582 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g63260.1 |
| Rice Genome Annotation | LOC_Os01g63260.1 |
| Ricechip | LOC_Os01g63260.1 |
| KEGG | osa:4324809 dosa:Os01t0851600-01 |
| Entrez-Gene | 4324809 |