RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g63290.1 View Network Show in Genome Browser |
| Other Names | Os01g0852200 |
| Description | transporter, major facilitator family, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 36687545-36691374 Nucleotide Length: 1560 |
| Protein-coding | LOC_Os01g63290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g46200 LOC_Os01g43090 LOC_Os01g27630 |
| Downstream Genes | LOC_Os04g27060 LOC_Os04g26910 LOC_Os04g26870 LOC_Os07g12890 LOC_Os06g02570 LOC_Os10g28320 LOC_Os04g26920 LOC_Os05g39560 LOC_Os04g44060 LOC_Os02g57720 LOC_Os08g10630 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR167a-5p osa-miR167b osa-miR167c-5p osa-miR167d-5p osa-miR167e-5p osa-miR167f osa-miR167g osa-miR167h-5p osa-miR167i-5p osa-miR167j |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g63290.1 |
| Rice Genome Annotation | LOC_Os01g63290.1 |
| Ricechip | LOC_Os01g63290.1 |
| KEGG | osa:4324813 dosa:Os01t0852200-03 |
| Entrez-Gene | 4324813 |