RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g63780.1 View Network Show in Genome Browser |
| Other Names | Os01g0856600 |
| Description | nsp1-like C-terminal region family protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 37005746-37011356 Nucleotide Length: 693 |
| Protein-coding | LOC_Os01g63780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54240 LOC_Os01g10350 LOC_Os01g44394 LOC_Os01g54550 |
| Downstream Genes | LOC_Os05g23950 LOC_Os02g39290 LOC_Os04g14190 LOC_Os11g03794 LOC_Os12g08070 LOC_Os12g03540 LOC_Os12g38110 LOC_Os09g28019 LOC_Os12g06890 LOC_Os12g06870 LOC_Os06g49080 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g63780.1 |
| Rice Genome Annotation | LOC_Os01g63780.1 |
| Ricechip | LOC_Os01g63780.1 |
| KEGG | osa:4324750 dosa:Os01t0856600-01 |
| Entrez-Gene | 4324750 |