RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g64090.1 View Network Show in Genome Browser |
| Other Names | Os01g0860300 |
| Description | L1P family of ribosomal proteins domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 37231748-37234375 Nucleotide Length: 717 |
| Protein-coding | LOC_Os01g64090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g19840 LOC_Os01g49290 LOC_Os01g25610 LOC_Os01g22490 LOC_Os01g10820 LOC_Os01g54870 LOC_Os01g59990 LOC_Os01g61814 LOC_Os01g62350 LOC_Os01g47660 LOC_Os01g47330 More.. |
| Downstream Genes | LOC_Os12g38000 LOC_Os03g18570 LOC_Os05g27940 LOC_Os03g18580 LOC_Os11g29190 LOC_Os03g22180 LOC_Os09g31180 LOC_Os11g11390 LOC_Os04g50990 LOC_Os05g28750 LOC_Os02g47140 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g64090.1 |
| Rice Genome Annotation | LOC_Os01g64090.1 |
| Ricechip | LOC_Os01g64090.1 |
| KEGG | osa:4325065 dosa:Os01t0860300-01 |
| Entrez-Gene | 4325065 |