RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g64100.1 View Network Show in Genome Browser |
| Other Names | Os01g0860400 |
| Description | glycosyl hydrolase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 37235781-37237357 Nucleotide Length: 894 |
| Protein-coding | LOC_Os01g64100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g58730 LOC_Os01g09200 |
| Downstream Genes | LOC_Os11g27400 LOC_Os04g30770 LOC_Os05g43570 LOC_Os04g52690 LOC_Os10g22570 LOC_Os05g41610 LOC_Os12g19290 LOC_Os05g01710 LOC_Os01g73890 LOC_Os10g33640 LOC_Os02g47410 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1436 osa-miR1320-5p osa-miR1439 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g64100.1 |
| Rice Genome Annotation | LOC_Os01g64100.1 |
| Ricechip | LOC_Os01g64100.1 |
| KEGG | osa:4325066 dosa:Os01t0860400-01 |
| Entrez-Gene | 4325066 |