RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g64270.1 View Network Show in Genome Browser |
| Other Names | Os01g0862200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 37315291-37316689 Nucleotide Length: 561 |
| Protein-coding | LOC_Os01g64270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48300 LOC_Os01g21990 LOC_Os01g53240 LOC_Os01g42730 LOC_Os01g46080 |
| Downstream Genes | LOC_Os12g02120 LOC_Os11g02180 LOC_Os03g45194 LOC_Os08g19140 LOC_Os08g16570 LOC_Os03g02640 LOC_Os07g11110 LOC_Os07g47540 LOC_Os01g66000 LOC_Os04g55180 LOC_Os03g12030 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g64270.1 |
| Rice Genome Annotation | LOC_Os01g64270.1 |
| Ricechip | LOC_Os01g64270.1 |
| KEGG | osa:4324744 dosa:Os01t0862200-02 |
| Entrez-Gene | 4324744 |