RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g64690.1 View Network Show in Genome Browser |
| Other Names | Os01g0866700 |
| Description | LSM domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 37527399-37529102 Nucleotide Length: 315 |
| Protein-coding | LOC_Os01g64690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g15310 LOC_Os01g64490 LOC_Os01g04910 LOC_Os01g56630 LOC_Os01g31629 LOC_Os01g25610 LOC_Os01g59990 LOC_Os01g48770 LOC_Os01g39630 LOC_Os01g10820 LOC_Os01g21180 More.. |
| Downstream Genes | LOC_Os04g36810 LOC_Os05g32310 LOC_Os02g30624 LOC_Os08g05530 LOC_Os04g31950 LOC_Os02g03440 LOC_Os02g01250 LOC_Os03g13760 LOC_Os04g39444 LOC_Os03g29740 LOC_Os08g08040 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g64690.1 |
| Rice Genome Annotation | LOC_Os01g64690.1 |
| Ricechip | LOC_Os01g64690.1 |
| KEGG | osa:4325074 dosa:Os01t0866700-01 |
| Entrez-Gene | 4325074 |