RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g65080.1 View Network Show in Genome Browser |
| Other Names | Os01g0871200 |
| Description | ZOS1-18 - C2H2 zinc finger protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 37773994-37778636 Nucleotide Length: 1569 |
| Protein-coding | LOC_Os01g65080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g46720 |
| Downstream Genes | LOC_Os04g11400 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2055 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g65080.1 |
| Rice Genome Annotation | LOC_Os01g65080.1 |
| Ricechip | LOC_Os01g65080.1 |
| KEGG | osa:4324940 dosa:Os01t0871200-01 |
| Entrez-Gene | 4324940 |