RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os01g65090.1 View Network Show in Genome Browser
Other Names	Os01g0871300
Description	aminotransferase, classes I and II, domain containing protein, expressed
Gene Attributes	Chromosome: Chr1 CDS Coordinates (5'-3'): 37779509-37782884 Nucleotide Length: 1377
Protein-coding	LOC_Os01g65090

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009790	embryo development	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g55540
Downstream Genes	LOC_Os06g35540 LOC_Os02g55420

Pathways
KEGG Pathways	rn00250 rn00710 rn01100 rn01110 rn01120 rn01210 rn00330 rn00270 rn00950 rn00401 rn00360 rn00400 rn00960 rn00350 rn00130
Metacyc Pathways	ASPARTATESYN-PWY ASPARAGINE-DEG1-PWY MALATE-ASPARTATE-SHUTTLE-PWY ASPARAGINE-BIOSYNTHESIS GLUTAMINEFUM-PWY PWY-6642 ASPARTATE-DEG1-PWY PWY-6643 GLUTDEG-PWY CYSTEINE-DEG-PWY PWY-6318 PWY-6638 PWY-5913 ETHYL-PWY PWY-4361 TYRFUMCAT-PWY PWY-5079 PHESYN

Reference
PubMed	16623902

Database Links
Gramene	LOC_Os01g65090.1
Rice Genome Annotation	LOC_Os01g65090.1
Ricechip	LOC_Os01g65090.1
KEGG	osa:4324941 dosa:Os01t0871300-01
Entrez-Gene	4324941