RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g65310.1 View Network Show in Genome Browser |
| Other Names | Os01g0873700 |
| Description | DUF803 domain containing, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 37887605-37890519 Nucleotide Length: 1092 |
| Protein-coding | LOC_Os01g65310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42430 |
| Downstream Genes | LOC_Os11g06890 LOC_Os02g34510 LOC_Os05g01560 LOC_Os01g73130 LOC_Os04g16450 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR818f |
| Pathways | |
|---|---|
| KEGG Pathways | rn00010 rn00680 rn01100 rn01110 rn01120 |
| Metacyc Pathways | P124-PWY ANAEROFRUCAT-PWY ANARESP1-PWY GLUCONEO-PWY PWY-1042 PWY-3801 GLYCOLYSIS |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g65310.1 |
| Rice Genome Annotation | LOC_Os01g65310.1 |
| Ricechip | LOC_Os01g65310.1 |
| KEGG | osa:4324766 dosa:Os01t0873700-01 |
| Entrez-Gene | 4324766 |