RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g65460.1 View Network Show in Genome Browser |
| Other Names | Os01g0875500 |
| Description | beta-galactosidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 37994513-38001584 Nucleotide Length: 2760 |
| Protein-coding | LOC_Os01g65460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g28540 LOC_Os01g45250 |
| Downstream Genes | LOC_Os02g53400 LOC_Os08g32930 LOC_Os01g70400 LOC_Os07g43390 LOC_Os02g55630 LOC_Os04g55180 LOC_Os07g38530 LOC_Os02g52280 LOC_Os03g36750 LOC_Os04g53490 LOC_Os05g37830 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00052 rn00531 rn00604 rn01100 rn00511 rn00600 |
| Metacyc Pathways | LACTOSEUTIL-PWY BGALACT-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g65460.1 |
| Rice Genome Annotation | LOC_Os01g65460.1 |
| Ricechip | LOC_Os01g65460.1 |
| KEGG | osa:4324777 dosa:Os01t0875500-01 |
| Entrez-Gene | 4324777 |