RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g65730.1 View Network Show in Genome Browser |
| Other Names | Os01g0879500 |
| Description | SET domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 38157319-38159785 Nucleotide Length: 1488 |
| Protein-coding | LOC_Os01g65730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54030 LOC_Os01g52500 LOC_Os01g09320 LOC_Os01g34200 LOC_Os01g07080 LOC_Os01g53250 LOC_Os01g65520 LOC_Os01g13730 LOC_Os01g59500 |
| Downstream Genes | LOC_Os03g44780 LOC_Os09g19560 LOC_Os06g03780 LOC_Os12g04010 LOC_Os03g22320 LOC_Os03g49210 LOC_Os11g04200 LOC_Os03g22880 LOC_Os03g51900 LOC_Os10g36470 LOC_Os03g25450 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5501 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g65730.1 |
| Rice Genome Annotation | LOC_Os01g65730.1 |
| Ricechip | LOC_Os01g65730.1 |
| KEGG | osa:4324838 dosa:Os01t0879500-01 |
| Entrez-Gene | 4324838 |