RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g66000.1 View Network Show in Genome Browser |
| Other Names | Os01g0882500 |
| Description | NADH dehydrogenase I subunit N, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 38306156-38307729 Nucleotide Length: 636 |
| Protein-coding | LOC_Os01g66000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g65992 LOC_Os01g21990 LOC_Os01g64270 LOC_Os01g48300 LOC_Os01g35050 LOC_Os01g65380 LOC_Os01g12390 LOC_Os01g45250 LOC_Os01g65460 |
| Downstream Genes | LOC_Os03g36750 LOC_Os01g68450 LOC_Os04g55180 LOC_Os08g19140 LOC_Os11g47730 LOC_Os07g05470 LOC_Os03g02640 LOC_Os05g40180 LOC_Os09g36520 LOC_Os03g32790 LOC_Os04g44650 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | AERESPDON-PWY ANARESPDON-PWY PWY-5083 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g66000.1 |
| Rice Genome Annotation | LOC_Os01g66000.1 |
| Ricechip | LOC_Os01g66000.1 |
| KEGG | osa:4324998 dosa:Os01t0882500-00 |
| Entrez-Gene | 4324998 |