RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g66140.1 View Network Show in Genome Browser |
| Other Names | Os01g0884500 |
| Description | plus-3 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 38413166-38424621 Nucleotide Length: 2679 |
| Protein-coding | LOC_Os01g66140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g56780 |
| Downstream Genes | LOC_Os12g35030 LOC_Os09g04720 LOC_Os08g39310 LOC_Os04g31320 LOC_Os03g55310 LOC_Os02g03730 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g66140.1 |
| Rice Genome Annotation | LOC_Os01g66140.1 |
| Ricechip | LOC_Os01g66140.1 |
| KEGG | osa:4325008 dosa:Os01t0884500-01 |
| Entrez-Gene | 4325008 |